Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015927926.1_cds_XP_016475614.1_67526
CDS Infomation

[gene=LOC107797256] [db_xref=GeneID:107797256] [protein=pentatricopeptide repeat-containing protein At3g02650, mitochondrial-like] [protein_id=XP_016475614.1] [location=complement(join(128429..129481,130918..132027))] [gbkey=CDS]
Sequence

ATGAATATGAAGCACTTAATTTCCAAACAAACTATCAACAATCTGTCAAAACTCAATGGT
AACATAAGAATTCTATCTCAATACCCCCATTTTCACCAGAATGCTCCAATCACTACATCC
TCCATTACACCTTCCATCTGTTCGACGAAGTATCGCACTGATCTTTTCCAACCCCAAAAT
CCAAAATTTCGAAAAATGGAATATTGGGGCAATAAAAGATTCGTTCACACAGCTGAAGAA
ATGGTAAGCGAGTCAGAAACCGAGTCAGAGGATGATGCCACAATGAACGATTTCCTGTCG
AGATTCGTTTGGATAATGCGTGGAAAGCTGGTTGAAGTGTATCCAGATTTTGAGAAGAAA
ACAATTGATGGGATGCTTTTGGTTATTGTAGGGAAGGTTGTATCTGAGCTGGAAAAGGGT
GGTTTTGATCAGATGATGGGGTCTGCAGTGGCGGCGTCAGAAGATTTTAGTGAGGATTTA
TGGAAGACAGTGTGGGAGGTGAGCAATGTGGTGTTGGAAGATATGGAGAAAGCAAAAAGG
AAGGAGAAAATGAAGAACTTTCTTCAAGCTGAGGAAGTTAAGGAGATGTGTAGGTTTGCT
GGTGAAGTGGGTATACGTGGAGACATGCTTAGGGAGTATAGGTTCAAATGGGCACGTGAG
AAGATGGAGGAGAGTGAGTTTTATCAGAGTCTTGAACGTCTTAAGGAAGAGGAAGAAAAA
TCAGCTCAAGAAGGGAGCTCATATGGTGGTATTGGGGCCATGGCCGTGGAGCAGGACAGT
GTTGGTGCAGAGGAGGAGCCTAAAGTTGTGTCTCTTCCGAAAAGGCGTGGGAAGCTTAAC
TACAAGATTTATGGACTTGATTTGTCTAATTCGAAATGGTCTGCAGTGGCCGATAAGATT
CATGAAGCTGAAAAAATCATATGGCCTCAAGAACCAAAACCAATAGCTGGCAAGTGCAAA
ATTGTTACTGACAAAATCCTTGCTTCACAAGAGGAAGATGATGCCTCTCTACTTCTAGCT
GAGTGGGTAGAACTTCTCCAACCTACCAGGGTAGACTGGGTCAATTTACTTGATAGATTG
AAGGAACGAAATCCTCATCTATATTTGAAGATTGCAGAACATGTGCTCGGTGAAGAGTCC
TTCCAAACAAACATACGTGACTACTCCAAACTCATTGATGCCCATGCTAGAGACAACCGC
CTAGCAGATGCTGAGAGAATTATCAAAAAGATGAGTGAAAATGGAATTGTACCTGATATT
CTCACATCAACAACCATGGTTCACATGTACAGCAAAGCAGGTGATCTGGATCAGGCAAAA
GCTGCATTCGAAAGCTTGAGGACTCAAGGATTCCTACCAGACATGGGAGTTTACAATTCC
ATGATCTTAGCCTATGTAAATGCTGGCGAACCAAAGTTGGGTGAATCATTGATGAGGGAA
ATGGAGGCAAGAGACATCAAGCCCTCTAAGGAGATTTTTATGGCCCTCCTAAGGTCATTT
GCTCAGCGTGGTGATGTTAATGGAGCCCAAAGAATAGCAACTACAATGCAGTTTTCAGGG
TTTCAGCCCACTTTAGAGTCATGTACATTACTTGTTGAGGCATTTGGCAAAGCTGGTGAC
CCTGATCAGGCAAGGCATAATTTTGATTACATGATTAAACTTGGGCACAAGCCAGATGAT
AGATGCACTGCTAGCATGATAGCAGCTTATGAGAAGAAGAACCTATTGGATAAAGCCTTA
AATCTTCTAATGGAGCTTGAGAAAGATGGTTTTGAGCCTGGGGTGGCTACTTACTCTGTT
TTGGTGGATTGGATGGGTAAAATGCAGCTAATTGATGAAGCTGAACAACTCTTGGATAAG
ATTGCTGAGCAGGGTGAGGCTCCTCCATTTAAGGTTCATATTAGTCTATGTGACATGTAT
GCAAGAGCTAATGCTGAGAAAAAGGCTCTTCAAGCTCTTGGAGTTTTGGAGGCCAAAAAG
GAGCAGTTGGGACCAGAAGAATTTGAGAGGATTATACAGTCACTTATAGCTGGTGGATTT
GTACAAGATGCTCAAAAGTTCCAAGGATTGATGGAAGGTCGGGGATTTACAGTATCCGAG
CAACTTAAAGTAACGCTCCAGGCATCTCAAACTTTTCTCCGCAGGAGACCATCTGTAAGA
TAA

Peptide Sequence

PEP ID

XP_016475614.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At3g02650, mitochondrial-like [Nicotiana tabacum]
Sequence

MNMKHLISKQTINNLSKLNGNIRILSQYPHFHQNAPITTSSITPSICSTKYRTDLFQPQN
PKFRKMEYWGNKRFVHTAEEMVSESETESEDDATMNDFLSRFVWIMRGKLVEVYPDFEKK
TIDGMLLVIVGKVVSELEKGGFDQMMGSAVAASEDFSEDLWKTVWEVSNVVLEDMEKAKR
KEKMKNFLQAEEVKEMCRFAGEVGIRGDMLREYRFKWAREKMEESEFYQSLERLKEEEEK
SAQEGSSYGGIGAMAVEQDSVGAEEEPKVVSLPKRRGKLNYKIYGLDLSNSKWSAVADKI
HEAEKIIWPQEPKPIAGKCKIVTDKILASQEEDDASLLLAEWVELLQPTRVDWVNLLDRL
KERNPHLYLKIAEHVLGEESFQTNIRDYSKLIDAHARDNRLADAERIIKKMSENGIVPDI
LTSTTMVHMYSKAGDLDQAKAAFESLRTQGFLPDMGVYNSMILAYVNAGEPKLGESLMRE
MEARDIKPSKEIFMALLRSFAQRGDVNGAQRIATTMQFSGFQPTLESCTLLVEAFGKAGD
PDQARHNFDYMIKLGHKPDDRCTASMIAAYEKKNLLDKALNLLMELEKDGFEPGVATYSV
LVDWMGKMQLIDEAEQLLDKIAEQGEAPPFKVHISLCDMYARANAEKKALQALGVLEAKK
EQLGPEEFERIIQSLIAGGFVQDAQKFQGLMEGRGFTVSEQLKVTLQASQTFLRRRPSVR

Transcript Sequence

Gene sequence data has not been registered.